本文整理了Java中uk.ac.ebi.intact.model.Feature.getShortLabel()
方法的一些代码示例,展示了Feature.getShortLabel()
的具体用法。这些代码示例主要来源于Github
/Stackoverflow
/Maven
等平台,是从一些精选项目中提取出来的代码,具有较强的参考意义,能在一定程度帮忙到你。Feature.getShortLabel()
方法的具体详情如下:
包路径:uk.ac.ebi.intact.model.Feature
类名称:Feature
方法名:getShortLabel
暂无
代码示例来源:origin: uk.ac.ebi.intact.util/data-conversion
System.out.println( "\t\tSelect an intact feature, shortlabel=" + intactFeature.getShortLabel() );
代码示例来源:origin: uk.ac.ebi.intact.app/data-conversion
System.out.println( "\t\tSelect an intact feature, shortlabel=" + intactFeature.getShortLabel() );
代码示例来源:origin: uk.ac.ebi.intact.dataexchange.psimi.legacy/data-conversion
System.out.println( "\t\tSelect an intact feature, shortlabel=" + intactFeature.getShortLabel() );
代码示例来源:origin: uk.ac.ebi.intact.core/intact-persister
log.debug("\t\t\tFeatures: ");
for (Feature f : c.getBindingDomains()) {
log.debug("\t\t\t\tFeature: "+f.getShortLabel());
代码示例来源:origin: uk.ac.ebi.intact.core/intact-core
protected UniquenessStringBuilder createUniquenessString(Feature feature) {
if (keyExists(feature)) {
UniquenessStringBuilder builder = getKey(feature);
if (builder != null){
return builder;
}
else{
identityToCrc.remove(System.identityHashCode(feature));
}
}
UniquenessStringBuilder sb = new UniquenessStringBuilder();
putKey(feature, sb);
if (feature == null) return sb;
// short label
// We need to add the short label for the feature because in mutations in the same amino acid is the only way to
// distinguish between two features when the AC is not assigned yet.
sb.append(feature.getShortLabel());
// feature type
sb.append(createUniquenessString(feature.getCvFeatureType()));
// feature identification
sb.append(createUniquenessString(feature.getCvFeatureIdentification()));
// ranges
List<Range> ranges = new ArrayList<Range>(feature.getRanges());
Collections.sort(ranges, new RangeComparator());
for (Range range : ranges) {
sb.append(createUniquenessString(range));
}
return sb;
}
代码示例来源:origin: uk.ac.ebi.intact.core/intact-core-readonly
protected UniquenessStringBuilder createUniquenessString(Feature feature) {
if (keyExists(feature)) {
UniquenessStringBuilder builder = getKey(feature);
if (builder != null){
return builder;
}
else{
identityToCrc.remove(System.identityHashCode(feature));
}
}
UniquenessStringBuilder sb = new UniquenessStringBuilder();
putKey(feature, sb);
if (feature == null) return sb;
// short label
// We need to add the short label for the feature because in mutations in the same amino acid is the only way to
// distinguish between two features when the AC is not assigned yet.
sb.append(feature.getShortLabel());
// feature type
sb.append(createUniquenessString(feature.getCvFeatureType()));
// feature identification
sb.append(createUniquenessString(feature.getCvFeatureIdentification()));
// ranges
List<Range> ranges = new ArrayList<Range>(feature.getRanges());
Collections.sort(ranges, new RangeComparator());
for (Range range : ranges) {
sb.append(createUniquenessString(range));
}
return sb;
}
代码示例来源:origin: uk.ac.ebi.intact.dataexchange.psimi/intact-psixml-converters
log.error("Feature without feature type " + intactObject.getShortLabel());
log.error("Feature without any ranges : " + intactObject.getShortLabel());
代码示例来源:origin: uk.ac.ebi.intact.dataexchange.psimi/intact-psixml-converters
log.error("Feature without feature type : " + feature.getShortLabel());
log.error("Feature without any ranges : " + feature.getShortLabel());
代码示例来源:origin: uk.ac.ebi.intact.core/intact-core-readonly
public Feature cloneFeature(Feature feature) throws IntactClonerException {
if (feature == null) return null;
Feature clone = new Feature();
clonerManager.addClone(feature, clone);
clone.setOwner(clone(feature.getOwner()));
clone.setShortLabel(feature.getShortLabel());
clone.setCvFeatureType(clone(feature.getCvFeatureType()));
clone.setCvFeatureIdentification(clone(feature.getCvFeatureIdentification()));
if (isCollectionClonable(feature.getRanges())) {
Collection<Range> ranges = IntactCore.ensureInitializedRanges(feature);
for (Range range : ranges) {
clone.addRange(clone(range));
}
}
clone.setComponent(clone(feature.getComponent()));
return clone;
}
代码示例来源:origin: uk.ac.ebi.intact.core/intact-core
public Feature cloneFeature(Feature feature) throws IntactClonerException {
if (feature == null) return null;
Feature clone = new Feature();
clonerManager.addClone(feature, clone);
clone.setOwner(clone(feature.getOwner()));
clone.setShortLabel(feature.getShortLabel());
clone.setCvFeatureType(clone(feature.getCvFeatureType()));
clone.setCvFeatureIdentification(clone(feature.getCvFeatureIdentification()));
if (isCollectionClonable(feature.getRanges())) {
Collection<Range> ranges = IntactCore.ensureInitializedRanges(feature);
for (Range range : ranges) {
clone.addRange(clone(range));
}
}
clone.setComponent(clone(feature.getComponent()));
return clone;
}
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