本文整理了Java中uk.ac.ebi.intact.model.Feature.addRange()
方法的一些代码示例,展示了Feature.addRange()
的具体用法。这些代码示例主要来源于Github
/Stackoverflow
/Maven
等平台,是从一些精选项目中提取出来的代码,具有较强的参考意义,能在一定程度帮忙到你。Feature.addRange()
方法的具体详情如下:
包路径:uk.ac.ebi.intact.model.Feature
类名称:Feature
方法名:addRange
[英]Adds a new Range object to a Feature instance. NOte that if the Range is already present then it will not be added again.
[中]将新范围对象添加到要素实例。请注意,如果该范围已存在,则不会再次添加该范围。
代码示例来源:origin: uk.ac.ebi.intact.core/intact-core
/**
* This creates a stable (non-random) interaction
*/
public Interaction createDeterministicInteraction() {
Interaction interaction = createInteraction("fooprey-barbait",
createDeterministicProtein("A2", "barbait"),
createDeterministicProtein("A1", "fooprey"),
createDeterministicExperiment());
interaction.getAnnotations().add(createAnnotation("This is an annotation", CvTopic.COMMENT_MI_REF, CvTopic.COMMENT));
CvFeatureType featureType = createCvObject(CvFeatureType.class, CvFeatureType.EXPERIMENTAL_FEATURE_MI_REF, CvFeatureType.EXPERIMENTAL_FEATURE);
Feature feature = createFeature("feature1", featureType);
feature.setComponent(null);
Range range = createRange(1, 1, 5, 5);
feature.addRange(range);
interaction.getComponents().iterator().next().addBindingDomain(feature);
// interaction.getComponents().iterator().next().addComponentParameter(createDeterministicComponentParameter());
// interaction.addXref(createPrimaryReferenceXref( interaction , "testreference"));
interaction.addConfidence( createDeterministicConfidence());
interaction.addParameter( createDeterministicInteractionParameter() );
return interaction;
}
代码示例来源:origin: uk.ac.ebi.intact.core/intact-core-readonly
/**
* This creates a stable (non-random) interaction
*/
public Interaction createDeterministicInteraction() {
Interaction interaction = createInteraction("fooprey-barbait",
createDeterministicProtein("A2", "barbait"),
createDeterministicProtein("A1", "fooprey"),
createDeterministicExperiment());
interaction.getAnnotations().add(createAnnotation("This is an annotation", CvTopic.COMMENT_MI_REF, CvTopic.COMMENT));
CvFeatureType featureType = createCvObject(CvFeatureType.class, CvFeatureType.EXPERIMENTAL_FEATURE_MI_REF, CvFeatureType.EXPERIMENTAL_FEATURE);
Feature feature = createFeature("feature1", featureType);
feature.setComponent(null);
Range range = createRange(1, 1, 5, 5);
feature.addRange(range);
interaction.getComponents().iterator().next().addBindingDomain(feature);
// interaction.getComponents().iterator().next().addComponentParameter(createDeterministicComponentParameter());
// interaction.addXref(createPrimaryReferenceXref( interaction , "testreference"));
interaction.addConfidence( createDeterministicConfidence());
interaction.addParameter( createDeterministicInteractionParameter() );
return interaction;
}
代码示例来源:origin: uk.ac.ebi.intact.dataexchange.psimi/intact-psixml-converters
feature.addRange(range);
代码示例来源:origin: uk.ac.ebi.intact.core/intact-core-readonly
public Feature cloneFeature(Feature feature) throws IntactClonerException {
if (feature == null) return null;
Feature clone = new Feature();
clonerManager.addClone(feature, clone);
clone.setOwner(clone(feature.getOwner()));
clone.setShortLabel(feature.getShortLabel());
clone.setCvFeatureType(clone(feature.getCvFeatureType()));
clone.setCvFeatureIdentification(clone(feature.getCvFeatureIdentification()));
if (isCollectionClonable(feature.getRanges())) {
Collection<Range> ranges = IntactCore.ensureInitializedRanges(feature);
for (Range range : ranges) {
clone.addRange(clone(range));
}
}
clone.setComponent(clone(feature.getComponent()));
return clone;
}
代码示例来源:origin: uk.ac.ebi.intact.core/intact-core
public Feature cloneFeature(Feature feature) throws IntactClonerException {
if (feature == null) return null;
Feature clone = new Feature();
clonerManager.addClone(feature, clone);
clone.setOwner(clone(feature.getOwner()));
clone.setShortLabel(feature.getShortLabel());
clone.setCvFeatureType(clone(feature.getCvFeatureType()));
clone.setCvFeatureIdentification(clone(feature.getCvFeatureIdentification()));
if (isCollectionClonable(feature.getRanges())) {
Collection<Range> ranges = IntactCore.ensureInitializedRanges(feature);
for (Range range : ranges) {
clone.addRange(clone(range));
}
}
clone.setComponent(clone(feature.getComponent()));
return clone;
}
代码示例来源:origin: uk.ac.ebi.intact.dataexchange.psimi.legacy/data-conversion
feature.addRange( range );
代码示例来源:origin: uk.ac.ebi.intact.util/data-conversion
feature.addRange( range );
代码示例来源:origin: uk.ac.ebi.intact.app/data-conversion
feature.addRange( range );
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