你可以试试这样东西。
此代码设置控制台窗口在控制台应用程序中的位置。

using System;
using System.Collections.Generic;
using System.Text;
using System.Runtime.InteropServices;

namespace ConsoleApplication10
{
  class Program
  {
    const int SWP_NOSIZE = 0x0001;

    [DllImport("kernel32.dll", ExactSpelling = true)]
    private static extern IntPtr GetConsoleWindow();

    private static IntPtr MyConsole = GetConsoleWindow();

    [DllImport("user32.dll", EntryPoint = "SetWindowPos")]
    public static extern IntPtr SetWindowPos(IntPtr hWnd, IntPtr hWndInsertAfter, int X, int Y, int cx, int cy, int wFlags);

    static void Main(string[] args)
    {
      int xpos = 300;
      int ypos = 300;
      SetWindowPos(MyConsole, 0, xpos, ypos, 0, 0, SWP_NOSIZE);
      Console.WriteLine("any text");
      Console.Read();
    }
  }
}

此代码设置控制台窗口在WinForm应用程序中的位置。

using System;
using System.Collections.Generic;
using System.Windows.Forms;
using System.Runtime.InteropServices;

namespace WindowsFormsApplication10
{
  static class Program
  {

    const int SWP_NOSIZE = 0x0001;

    [System.Runtime.InteropServices.DllImport("kernel32.dll")]
    private static extern bool AllocConsole();

    [DllImport("user32.dll", EntryPoint = "SetWindowPos")]
    public static extern IntPtr SetWindowPos(IntPtr hWnd, IntPtr hWndInsertAfter, int X, int Y, int cx, int cy, int wFlags);

    [DllImport("kernel32.dll", SetLastError = true)]
    public static extern IntPtr GetConsoleWindow();

    [STAThread]
    static void Main()
    {
      AllocConsole();
      IntPtr MyConsole = GetConsoleWindow();
      int xpos = 1024;
      int ypos = 0;
      SetWindowPos(MyConsole, 0, xpos, ypos, 0, 0, SWP_NOSIZE);
      Console.WindowLeft=0;
      Console.WriteLine("text in my console");

      Application.EnableVisualStyles();
      Application.SetCompatibleTextRenderingDefault(false);
      Application.Run(new Form1());
    }
  }
}