本文整理了Java中org.intermine.metadata.Util.addToSetMap()
方法的一些代码示例,展示了Util.addToSetMap()
的具体用法。这些代码示例主要来源于Github
/Stackoverflow
/Maven
等平台,是从一些精选项目中提取出来的代码,具有较强的参考意义,能在一定程度帮忙到你。Util.addToSetMap()
方法的具体详情如下:
包路径:org.intermine.metadata.Util
类名称:Util
方法名:addToSetMap
[英]Add a value to a Map from keys to Set of values, creating the value list as needed.
[中]将值添加到从键到值集的映射中,根据需要创建值列表。
代码示例来源:origin: org.intermine/bio-core
private void assignPartOf(String parent, String child) {
if (!StringUtils.isEmpty(child) && !StringUtils.isEmpty(parent)) {
Util.addToSetMap(partOfs, child, parent);
}
}
代码示例来源:origin: org.intermine/bio-core
private void buildParentsMap() {
parentToChildren = new HashMap<String, Set<String>>();
for (String child : childToParents.keySet()) {
Set<String> parents = childToParents.get(child);
for (String parent : parents) {
if (!StringUtils.isEmpty(child) && !StringUtils.isEmpty(parent)) {
Util.addToSetMap(parentToChildren, parent, child);
}
}
}
}
代码示例来源:origin: org.intermine/bio-core
private void setReverseReferences() {
Map<String, Set<String>> partOfsCopy = new HashMap<String, Set<String>>(partOfs);
for (Map.Entry<String, Set<String>> entry : partOfsCopy.entrySet()) {
String oboTerm = entry.getKey();
Set<String> parents = new HashSet<String>(entry.getValue());
for (String parent : parents) {
if (parent.equals(CHROMOSOME)) {
continue;
}
if (!StringUtils.isEmpty(oboTerm) && !StringUtils.isEmpty(parent)) {
Util.addToSetMap(reversePartOfs, parent, oboTerm);
}
}
}
}
代码示例来源:origin: org.intermine/bio-core
/**
* Parse all xref, some gene will have multiple id from same source
* e.g. P2RX5 HGNC:8536|MIM:602836|Ensembl:ENSG00000083454|Ensembl:ENSG00000257950|HPRD:09110|
* Vega:OTTHUMG00000090700|Vega:OTTHUMG00000169623
*
* @param xrefs a "|" separated string
* @return a map of xrefs
*/
private static Map<String, Set<String>> parseXrefs(String xrefs) {
Map<String, Set<String>> xrefMap = new HashMap<String, Set<String>>();
for (String xref : xrefs.split("\\|")) {
if (!xref.startsWith("-")) {
String[] bits = xref.split(":", 2);
Util.addToSetMap(xrefMap, bits[0], bits[1]);
}
}
return xrefMap;
}
}
代码示例来源:origin: org.intermine/bio-core
String parent = bits[1];
if (!StringUtils.isEmpty(parent) && !StringUtils.isEmpty(child)) {
Util.addToSetMap(manyToMany, child, parent.trim());
代码示例来源:origin: org.intermine/bio-core
private Map<String, Set<String>> removeRelationshipFromChildren(Map<String, Set<String>> map1,
Map<String, Set<String>> map2, Map<String, Set<String>> invalidPartOfs, String parent,
String collectionName) {
Set<String> children = parentToChildren.get(parent);
if (children == null) {
return Collections.emptyMap();
}
for (String child : children) {
// this relationship is in config, so we can't delete
// remove parent relationship instead
if (isManyToMany(collectionName, child)) {
if (!StringUtils.isEmpty(collectionName) && !StringUtils.isEmpty(parent)) {
Util.addToSetMap(invalidPartOfs, parent, collectionName);
}
continue;
}
removeRelationship(map1, map2, child, collectionName);
removeRelationshipFromChildren(map1, map2, invalidPartOfs, child, collectionName);
}
return invalidPartOfs;
}
代码示例来源:origin: org.intermine/intermine-api
private void processAdditionalConverters(Attributes attrs) {
String fullyQualifiedName = attrs.getValue("class-name");
String constraintPath = attrs.getValue("constraint-path");
String targetType = attrs.getValue("target-type");
String title = attrs.getValue("title");
String urlField = attrs.getValue("urlField");
ClassDescriptor typeCld = model.getClassDescriptorByName(targetType);
if (typeCld == null) {
LOG.warn("Invalid target type for additional converter: " + targetType);
return;
}
try {
new Path(model, constraintPath);
} catch (PathException e) {
LOG.warn("Can't add converter to bag-queries.xml, constraint-path '" + constraintPath
+ "' isn't in " + model.getName() + " model.");
return;
}
Set<String> clds = new HashSet<String>();
clds.add(typeCld.getName());
for (ClassDescriptor cld : model.getAllSubs(typeCld)) {
clds.add(cld.getName());
}
AdditionalConverter additionalConverter = new AdditionalConverter(constraintPath,
targetType, fullyQualifiedName, title, urlField);
for (String nextCld : clds) {
Util.addToSetMap(additionalConverters, TypeUtil.unqualifiedName(nextCld),
additionalConverter);
}
}
代码示例来源:origin: intermine/intermine
private void processAdditionalConverters(Attributes attrs) {
String fullyQualifiedName = attrs.getValue("class-name");
String constraintPath = attrs.getValue("constraint-path");
String targetType = attrs.getValue("target-type");
String title = attrs.getValue("title");
String urlField = attrs.getValue("urlField");
ClassDescriptor typeCld = model.getClassDescriptorByName(targetType);
if (typeCld == null) {
LOG.warn("Invalid target type for additional converter: " + targetType);
return;
}
try {
new Path(model, constraintPath);
} catch (PathException e) {
LOG.warn("Can't add converter to bag-queries.xml, constraint-path '" + constraintPath
+ "' isn't in " + model.getName() + " model.");
return;
}
Set<String> clds = new HashSet<String>();
clds.add(typeCld.getName());
for (ClassDescriptor cld : model.getAllSubs(typeCld)) {
clds.add(cld.getName());
}
AdditionalConverter additionalConverter = new AdditionalConverter(constraintPath,
targetType, fullyQualifiedName, title, urlField);
for (String nextCld : clds) {
Util.addToSetMap(additionalConverters, TypeUtil.unqualifiedName(nextCld),
additionalConverter);
}
}
代码示例来源:origin: org.intermine/bio-core
assignPartOf(parent, child);
} else if ("is_a".equals(relationshipType) && r.direct) {
Util.addToSetMap(childToParents, child, parent);
内容来源于网络,如有侵权,请联系作者删除!