本文整理了Java中htsjdk.samtools.util.Histogram.getValueLabel()
方法的一些代码示例,展示了Histogram.getValueLabel()
的具体用法。这些代码示例主要来源于Github
/Stackoverflow
/Maven
等平台,是从一些精选项目中提取出来的代码,具有较强的参考意义,能在一定程度帮忙到你。Histogram.getValueLabel()
方法的具体详情如下:
包路径:htsjdk.samtools.util.Histogram
类名称:Histogram
方法名:getValueLabel
暂无
代码示例来源:origin: samtools/htsjdk
for (final Histogram<HKEY> histo : nonEmptyHistograms) {
out.append(SEPARATOR);
out.append(StringUtil.assertCharactersNotInString(histo.getValueLabel(), '\t', '\n'));
代码示例来源:origin: com.github.samtools/htsjdk
for (final Histogram<HKEY> histo : nonEmptyHistograms) {
out.append(SEPARATOR);
out.append(StringUtil.assertCharactersNotInString(histo.getValueLabel(), '\t', '\n'));
代码示例来源:origin: org.seqdoop/htsjdk
for (final Histogram<HKEY> histo : nonEmptyHistograms) {
out.append(SEPARATOR);
out.append(StringUtil.assertCharactersNotInString(histo.getValueLabel(), '\t', '\n'));
代码示例来源:origin: samtools/htsjdk
@Test
public void testLabels() {
final int[] is = {4,4,5,5,5};
final Histogram<Integer> histo = new Histogram<>("FOO", "BAR");
for (final int i : is) histo.increment(i);
Assert.assertEquals(histo.getBinLabel(),"FOO");
Assert.assertEquals(histo.getValueLabel(),"BAR");
}
代码示例来源:origin: broadinstitute/picard
@Override
public void test() throws IOException {
final MetricsFile<DuplicationMetrics, Double> metricsOutput = testMetrics();
// Check contents of set size bin against expected values
if (!expectedSetSizeMap.isEmpty()) {
boolean checked = false;
for (final Histogram<Double> histo : metricsOutput.getAllHistograms()) {
final String label = histo.getValueLabel();
for (final Double bin : histo.keySet()) {
final String binStr = String.valueOf(bin);
final List<String> labelBinStr = Arrays.asList(label, binStr);
if (expectedSetSizeMap.containsKey(labelBinStr)) {
checked = true;
Histogram.Bin<Double> binValue = histo.get(bin);
final double actual = binValue.getValue();
final double expected = expectedSetSizeMap.get(labelBinStr);
Assert.assertEquals(actual, expected);
}
}
}
if (!checked) {
Assert.fail("Could not not find matching entry for expectedSetSizeMap in metrics.");
}
}
}
代码示例来源:origin: broadinstitute/picard
if (histogram.getValueLabel().equals("count_WHOLE_GENOME")) {
Assert.assertEquals(histogram.get(0).getValue(), 1080d);
} else {
代码示例来源:origin: broadinstitute/picard
if (histogram.getValueLabel().equals("count_WHOLE_GENOME")) {
Assert.assertEquals(histogram.get(0).getValue(), 274d);
} else {
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